Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CopaQ8CIE6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.8□□□□□ -0.04
CopaQ8CIE6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CopaQ8CIE6 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopaQ8CIE6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CopaQ8CIE6 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.79□□□□□ -0.04
CopaQ8CIE6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Gm18057-201ENSMUST00000208220 503 ntBASIC14.79□□□□□ -0.04
CopaQ8CIE6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopaQ8CIE6 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.79□□□□□ -0.04
CopaQ8CIE6 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.79□□□□□ -0.04
CopaQ8CIE6 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.79□□□□□ -0.04
CopaQ8CIE6 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.79□□□□□ -0.04
CopaQ8CIE6 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CopaQ8CIE6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CopaQ8CIE6 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.78□□□□□ -0.04
CopaQ8CIE6 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.78□□□□□ -0.04
CopaQ8CIE6 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CopaQ8CIE6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CopaQ8CIE6 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CopaQ8CIE6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CopaQ8CIE6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CopaQ8CIE6 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms