Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Rab11fip3Q8CHD8 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rab11fip3Q8CHD8 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rab11fip3Q8CHD8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab11fip3Q8CHD8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rab11fip3Q8CHD8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab11fip3Q8CHD8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab11fip3Q8CHD8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab11fip3Q8CHD8 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rab11fip3Q8CHD8 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rab11fip3Q8CHD8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab11fip3Q8CHD8 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab11fip3Q8CHD8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab11fip3Q8CHD8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Rab11fip3Q8CHD8 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rab11fip3Q8CHD8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rab11fip3Q8CHD8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Efs-202ENSMUST00000227037 2540 ntBASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Gm7390-201ENSMUST00000212452 1216 ntBASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 AC155729.1-201ENSMUST00000227758 544 ntBASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Gm6263-201ENSMUST00000120029 1342 ntBASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Gm14451-201ENSMUST00000121581 1542 ntBASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rab11fip3Q8CHD8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Gm15393-201ENSMUST00000120499 219 ntBASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 AC135669.1-201ENSMUST00000213585 412 ntBASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rab11fip3Q8CHD8 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Gm15460-201ENSMUST00000118147 391 ntBASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Gm44608-201ENSMUST00000206827 855 ntBASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 AC154806.6-201ENSMUST00000228192 202 ntBASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rab11fip3Q8CHD8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms