Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc5Q8CG46 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc5Q8CG46 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc5Q8CG46 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc5Q8CG46 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smc5Q8CG46 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc5Q8CG46 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc5Q8CG46 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc5Q8CG46 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc5Q8CG46 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smc5Q8CG46 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.91■□□□□ 0.46
Smc5Q8CG46 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.91■□□□□ 0.46
Smc5Q8CG46 Gm10275-202ENSMUST00000168697 495 ntBASIC17.91■□□□□ 0.46
Smc5Q8CG46 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Smc5Q8CG46 Thap2-203ENSMUST00000218989 527 ntBASIC17.91■□□□□ 0.46
Smc5Q8CG46 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smc5Q8CG46 Gm10275-201ENSMUST00000092620 635 ntBASIC17.91■□□□□ 0.46
Smc5Q8CG46 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC17.91■□□□□ 0.46
Smc5Q8CG46 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc5Q8CG46 Gm11405-201ENSMUST00000118689 1556 ntBASIC17.91■□□□□ 0.46
Smc5Q8CG46 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc5Q8CG46 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Smc5Q8CG46 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smc5Q8CG46 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc5Q8CG46 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.9■□□□□ 0.46
Smc5Q8CG46 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Smc5Q8CG46 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Smc5Q8CG46 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc5Q8CG46 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
Smc5Q8CG46 Gm12626-201ENSMUST00000117339 1983 ntBASIC17.9■□□□□ 0.46
Smc5Q8CG46 Gm12623-201ENSMUST00000119849 1983 ntBASIC17.9■□□□□ 0.46
Smc5Q8CG46 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Smc5Q8CG46 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.9■□□□□ 0.46
Smc5Q8CG46 Gm9385-201ENSMUST00000117563 472 ntBASIC17.9■□□□□ 0.46
Smc5Q8CG46 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.9■□□□□ 0.46
Smc5Q8CG46 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.9■□□□□ 0.46
Smc5Q8CG46 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.9■□□□□ 0.46
Smc5Q8CG46 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc5Q8CG46 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc5Q8CG46 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc5Q8CG46 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc5Q8CG46 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc5Q8CG46 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smc5Q8CG46 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Smc5Q8CG46 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc5Q8CG46 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc5Q8CG46 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smc5Q8CG46 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smc5Q8CG46 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.89■□□□□ 0.45
Smc5Q8CG46 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smc5Q8CG46 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smc5Q8CG46 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc5Q8CG46 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC17.89■□□□□ 0.45
Smc5Q8CG46 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Smc5Q8CG46 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc5Q8CG46 Gm12350-201ENSMUST00000121208 462 ntBASIC17.89■□□□□ 0.45
Smc5Q8CG46 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smc5Q8CG46 Mir5131-201ENSMUST00000175426 93 ntBASIC17.89■□□□□ 0.45
Smc5Q8CG46 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.89■□□□□ 0.45
Smc5Q8CG46 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smc5Q8CG46 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smc5Q8CG46 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.89■□□□□ 0.45
Smc5Q8CG46 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc5Q8CG46 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc5Q8CG46 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smc5Q8CG46 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Smc5Q8CG46 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc5Q8CG46 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Smc5Q8CG46 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smc5Q8CG46 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc5Q8CG46 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Smc5Q8CG46 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc5Q8CG46 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc5Q8CG46 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc5Q8CG46 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Smc5Q8CG46 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Smc5Q8CG46 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc5Q8CG46 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smc5Q8CG46 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc5Q8CG46 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Smc5Q8CG46 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smc5Q8CG46 Gm27301-201ENSMUST00000184012 127 ntBASIC17.88■□□□□ 0.45
Smc5Q8CG46 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc5Q8CG46 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc5Q8CG46 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Smc5Q8CG46 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc5Q8CG46 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC17.88■□□□□ 0.45
Smc5Q8CG46 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc5Q8CG46 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc5Q8CG46 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
Smc5Q8CG46 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc5Q8CG46 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.88■□□□□ 0.45
Smc5Q8CG46 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc5Q8CG46 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc5Q8CG46 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc5Q8CG46 Gm38197-201ENSMUST00000192320 2122 ntBASIC17.87■□□□□ 0.45
Smc5Q8CG46 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.87■□□□□ 0.45
Smc5Q8CG46 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc5Q8CG46 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smc5Q8CG46 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms