Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm5279-201ENSMUST00000199575 745 ntBASIC17.78■□□□□ 0.44
Trim52Q8CDV4 AC155286.1-201ENSMUST00000218632 448 ntBASIC17.78■□□□□ 0.44
Trim52Q8CDV4 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim52Q8CDV4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim52Q8CDV4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim52Q8CDV4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim52Q8CDV4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim52Q8CDV4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim52Q8CDV4 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim52Q8CDV4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.77■□□□□ 0.44
Trim52Q8CDV4 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim52Q8CDV4 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim52Q8CDV4 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim52Q8CDV4 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim52Q8CDV4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim52Q8CDV4 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.77■□□□□ 0.44
Trim52Q8CDV4 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim52Q8CDV4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim52Q8CDV4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim52Q8CDV4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim52Q8CDV4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim52Q8CDV4 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trim52Q8CDV4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trim52Q8CDV4 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim52Q8CDV4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim52Q8CDV4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim52Q8CDV4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim52Q8CDV4 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim52Q8CDV4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim52Q8CDV4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Trim52Q8CDV4 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
Trim52Q8CDV4 Gm12341-201ENSMUST00000119724 503 ntBASIC17.76■□□□□ 0.43
Trim52Q8CDV4 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim52Q8CDV4 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC17.76■□□□□ 0.43
Trim52Q8CDV4 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
Trim52Q8CDV4 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim52Q8CDV4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim52Q8CDV4 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim52Q8CDV4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.76■□□□□ 0.43
Trim52Q8CDV4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim52Q8CDV4 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.76■□□□□ 0.43
Trim52Q8CDV4 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Trim52Q8CDV4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Trim52Q8CDV4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim52Q8CDV4 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Gm15678-201ENSMUST00000117573 960 ntBASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Gm18187-201ENSMUST00000196476 984 ntBASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Gm17795-201ENSMUST00000214505 757 ntBASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Gm18027-201ENSMUST00000218947 619 ntBASIC17.75■□□□□ 0.43
Trim52Q8CDV4 AC162801.1-201ENSMUST00000220612 198 ntBASIC17.75■□□□□ 0.43
Trim52Q8CDV4 AC159006.1-201ENSMUST00000226396 258 ntBASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trim52Q8CDV4 AC154527.2-201ENSMUST00000225256 1466 ntBASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim52Q8CDV4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim52Q8CDV4 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms