Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Q8CD60 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Q8CD60 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Q8CD60 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.24■□□□□ 0.03
Q8CD60 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Q8CD60 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Q8CD60 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Q8CD60 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Q8CD60 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Q8CD60 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Q8CD60 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Q8CD60 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Q8CD60 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Q8CD60 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Q8CD60 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.23■□□□□ 0.03
Q8CD60 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Q8CD60 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Q8CD60 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.23■□□□□ 0.03
Q8CD60 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.23■□□□□ 0.03
Q8CD60 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Q8CD60 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.23■□□□□ 0.03
Q8CD60 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.23■□□□□ 0.03
Q8CD60 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Q8CD60 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Q8CD60 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Q8CD60 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Q8CD60 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.23■□□□□ 0.03
Q8CD60 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Q8CD60 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Q8CD60 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Q8CD60 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.22■□□□□ 0.03
Q8CD60 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Q8CD60 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.22■□□□□ 0.03
Q8CD60 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Q8CD60 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Q8CD60 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Q8CD60 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Q8CD60 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Q8CD60 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Q8CD60 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Q8CD60 Gm13015-201ENSMUST00000118674 204 ntBASIC15.22■□□□□ 0.03
Q8CD60 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.22■□□□□ 0.03
Q8CD60 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Q8CD60 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Q8CD60 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Q8CD60 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.22■□□□□ 0.03
Q8CD60 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.22■□□□□ 0.03
Q8CD60 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.22■□□□□ 0.03
Q8CD60 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.22■□□□□ 0.03
Q8CD60 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Q8CD60 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Q8CD60 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Q8CD60 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Q8CD60 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.22■□□□□ 0.03
Q8CD60 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Q8CD60 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.22■□□□□ 0.03
Q8CD60 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Q8CD60 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Q8CD60 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Q8CD60 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Q8CD60 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Q8CD60 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Q8CD60 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.22■□□□□ 0.03
Q8CD60 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Q8CD60 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.22■□□□□ 0.03
Q8CD60 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Q8CD60 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Q8CD60 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Q8CD60 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Q8CD60 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Q8CD60 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Q8CD60 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Q8CD60 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Q8CD60 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Q8CD60 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Q8CD60 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Q8CD60 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Q8CD60 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Q8CD60 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.21■□□□□ 0.03
Q8CD60 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Q8CD60 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Q8CD60 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Q8CD60 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Q8CD60 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Q8CD60 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Q8CD60 Gm5867-201ENSMUST00000063197 592 ntBASIC15.21■□□□□ 0.03
Q8CD60 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Q8CD60 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Q8CD60 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.21■□□□□ 0.03
Q8CD60 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Q8CD60 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Q8CD60 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.21■□□□□ 0.03
Q8CD60 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Q8CD60 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Q8CD60 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Q8CD60 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Q8CD60 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Q8CD60 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.2■□□□□ 0.02
Q8CD60 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Q8CD60 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms