Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SynpoQ8CC35 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.03□□□□□ -0.16
SynpoQ8CC35 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.03□□□□□ -0.16
SynpoQ8CC35 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.03□□□□□ -0.16
SynpoQ8CC35 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.03□□□□□ -0.16
SynpoQ8CC35 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.03□□□□□ -0.16
SynpoQ8CC35 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SynpoQ8CC35 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SynpoQ8CC35 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SynpoQ8CC35 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.03□□□□□ -0.16
SynpoQ8CC35 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SynpoQ8CC35 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SynpoQ8CC35 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SynpoQ8CC35 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
SynpoQ8CC35 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SynpoQ8CC35 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SynpoQ8CC35 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SynpoQ8CC35 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SynpoQ8CC35 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SynpoQ8CC35 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SynpoQ8CC35 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SynpoQ8CC35 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SynpoQ8CC35 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SynpoQ8CC35 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SynpoQ8CC35 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SynpoQ8CC35 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SynpoQ8CC35 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.02□□□□□ -0.16
SynpoQ8CC35 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SynpoQ8CC35 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SynpoQ8CC35 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SynpoQ8CC35 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
SynpoQ8CC35 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SynpoQ8CC35 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
SynpoQ8CC35 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.02□□□□□ -0.16
SynpoQ8CC35 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SynpoQ8CC35 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SynpoQ8CC35 Celf4-206ENSMUST00000224553 1729 ntBASIC14.02□□□□□ -0.16
SynpoQ8CC35 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SynpoQ8CC35 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.02□□□□□ -0.16
SynpoQ8CC35 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SynpoQ8CC35 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SynpoQ8CC35 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SynpoQ8CC35 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.02□□□□□ -0.17
SynpoQ8CC35 Gm9385-201ENSMUST00000117563 472 ntBASIC14.02□□□□□ -0.17
SynpoQ8CC35 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SynpoQ8CC35 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SynpoQ8CC35 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.02□□□□□ -0.17
SynpoQ8CC35 Gm20553-201ENSMUST00000204205 844 ntBASIC14.02□□□□□ -0.17
SynpoQ8CC35 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.02□□□□□ -0.17
SynpoQ8CC35 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.02□□□□□ -0.17
SynpoQ8CC35 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SynpoQ8CC35 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SynpoQ8CC35 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.02□□□□□ -0.17
SynpoQ8CC35 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SynpoQ8CC35 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SynpoQ8CC35 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
SynpoQ8CC35 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SynpoQ8CC35 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SynpoQ8CC35 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SynpoQ8CC35 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SynpoQ8CC35 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.02□□□□□ -0.17
SynpoQ8CC35 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SynpoQ8CC35 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SynpoQ8CC35 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.02□□□□□ -0.17
SynpoQ8CC35 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SynpoQ8CC35 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
SynpoQ8CC35 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
SynpoQ8CC35 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Carlr-201ENSMUST00000181515 2574 ntBASIC14.01□□□□□ -0.17
SynpoQ8CC35 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.01□□□□□ -0.17
SynpoQ8CC35 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SynpoQ8CC35 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14□□□□□ -0.17
SynpoQ8CC35 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms