Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a6Q8C6K9 Gm12742-201ENSMUST00000117326 410 ntBASIC13.02□□□□□ -0.32
Col6a6Q8C6K9 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a6Q8C6K9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a6Q8C6K9 Snora78-201ENSMUST00000158630 128 ntBASIC13.02□□□□□ -0.32
Col6a6Q8C6K9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.02□□□□□ -0.32
Col6a6Q8C6K9 Gm8463-201ENSMUST00000208573 613 ntBASIC13.02□□□□□ -0.32
Col6a6Q8C6K9 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a6Q8C6K9 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a6Q8C6K9 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a6Q8C6K9 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a6Q8C6K9 Gm10478-201ENSMUST00000084451 396 ntBASIC13.02□□□□□ -0.32
Col6a6Q8C6K9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Col6a6Q8C6K9 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.02□□□□□ -0.32
Col6a6Q8C6K9 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.02□□□□□ -0.32
Col6a6Q8C6K9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a6Q8C6K9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a6Q8C6K9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col6a6Q8C6K9 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Gm14660-201ENSMUST00000119809 575 ntBASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Gm17420-201ENSMUST00000164753 153 ntBASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Gm45784-201ENSMUST00000188360 142 ntBASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.02□□□□□ -0.33
Col6a6Q8C6K9 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Gm4984-201ENSMUST00000115987 360 ntBASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Gm6244-201ENSMUST00000178732 841 ntBASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col6a6Q8C6K9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms