Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Nup54Q8BTS4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Gm25144-201ENSMUST00000179561 110 ntBASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Gm25352-201ENSMUST00000179815 110 ntBASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup54Q8BTS4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Gm24543-201ENSMUST00000103867 82 ntBASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Gm38294-201ENSMUST00000192831 381 ntBASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Gm45453-201ENSMUST00000211758 853 ntBASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nup54Q8BTS4 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.8□□□□□ -0.04
Nup54Q8BTS4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nup54Q8BTS4 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup54Q8BTS4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup54Q8BTS4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup54Q8BTS4 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup54Q8BTS4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup54Q8BTS4 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.79□□□□□ -0.04
Nup54Q8BTS4 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nup54Q8BTS4 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nup54Q8BTS4 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nup54Q8BTS4 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms