Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp2bQ8BJF9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp2bQ8BJF9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Gm13464-201ENSMUST00000119418 935 ntBASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Gm10060-201ENSMUST00000212002 111 ntBASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chmp2bQ8BJF9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.83□□□□□ -0.03
Chmp2bQ8BJF9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chmp2bQ8BJF9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chmp2bQ8BJF9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chmp2bQ8BJF9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.83□□□□□ -0.03
Chmp2bQ8BJF9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Gm17971-201ENSMUST00000190239 806 ntBASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chmp2bQ8BJF9 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms