Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Clrn3Q8BHH8 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Clrn3Q8BHH8 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Gm45747-201ENSMUST00000212203 999 ntBASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Clrn3Q8BHH8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn3Q8BHH8 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Clrn3Q8BHH8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn3Q8BHH8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn3Q8BHH8 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn3Q8BHH8 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn3Q8BHH8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn3Q8BHH8 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn3Q8BHH8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.6□□□□□ -0.23
Clrn3Q8BHH8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn3Q8BHH8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn3Q8BHH8 Gm15427-201ENSMUST00000117288 531 ntBASIC13.6□□□□□ -0.23
Clrn3Q8BHH8 Gm14494-201ENSMUST00000118786 435 ntBASIC13.6□□□□□ -0.23
Clrn3Q8BHH8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Clrn3Q8BHH8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.6□□□□□ -0.23
Clrn3Q8BHH8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Clrn3Q8BHH8 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms