Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Gm13884-201ENSMUST00000118103 829 ntBASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Gm28659-201ENSMUST00000188013 759 ntBASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Gm5864-201ENSMUST00000202263 970 ntBASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Krr1Q8BGA5 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Gm23547-201ENSMUST00000158210 271 ntBASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Gm43767-201ENSMUST00000198933 381 ntBASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Gm45167-201ENSMUST00000208007 322 ntBASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Gm10060-201ENSMUST00000212002 111 ntBASIC13.72□□□□□ -0.21
Krr1Q8BGA5 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
Krr1Q8BGA5 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.72□□□□□ -0.21
Krr1Q8BGA5 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krr1Q8BGA5 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Krr1Q8BGA5 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Krr1Q8BGA5 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krr1Q8BGA5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Krr1Q8BGA5 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krr1Q8BGA5 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krr1Q8BGA5 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krr1Q8BGA5 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Krr1Q8BGA5 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Krr1Q8BGA5 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Krr1Q8BGA5 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Krr1Q8BGA5 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krr1Q8BGA5 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krr1Q8BGA5 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krr1Q8BGA5 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krr1Q8BGA5 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Krr1Q8BGA5 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Krr1Q8BGA5 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.71□□□□□ -0.21
Krr1Q8BGA5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.71□□□□□ -0.21
Krr1Q8BGA5 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms