Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Gm19891-201ENSMUST00000189771 303 ntBASIC14.29□□□□□ -0.12
Ubp1Q811S7 Gm43125-201ENSMUST00000201724 730 ntBASIC14.29□□□□□ -0.12
Ubp1Q811S7 Gm45098-201ENSMUST00000207179 657 ntBASIC14.29□□□□□ -0.12
Ubp1Q811S7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubp1Q811S7 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.29□□□□□ -0.12
Ubp1Q811S7 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ubp1Q811S7 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubp1Q811S7 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubp1Q811S7 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ubp1Q811S7 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.28□□□□□ -0.12
Ubp1Q811S7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.28□□□□□ -0.12
Ubp1Q811S7 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Gm43474-201ENSMUST00000196415 774 ntBASIC14.28□□□□□ -0.12
Ubp1Q811S7 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.28□□□□□ -0.12
Ubp1Q811S7 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Olfr286-202ENSMUST00000205305 969 ntBASIC14.28□□□□□ -0.12
Ubp1Q811S7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ubp1Q811S7 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ubp1Q811S7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubp1Q811S7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubp1Q811S7 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Ubp1Q811S7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.27□□□□□ -0.12
Ubp1Q811S7 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.27□□□□□ -0.12
Ubp1Q811S7 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubp1Q811S7 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubp1Q811S7 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.27□□□□□ -0.12
Ubp1Q811S7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ubp1Q811S7 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubp1Q811S7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Ubp1Q811S7 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ubp1Q811S7 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Gm2810-201ENSMUST00000118681 990 ntBASIC14.27□□□□□ -0.13
Ubp1Q811S7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Gm38225-201ENSMUST00000194001 393 ntBASIC14.27□□□□□ -0.13
Ubp1Q811S7 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ubp1Q811S7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms