Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm44466-201ENSMUST00000200264 138 ntBASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Gm44359-201ENSMUST00000200671 138 ntBASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk3bQ80YF6 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk3bQ80YF6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms