Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Prpf40bQ80W14 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf40bQ80W14 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf40bQ80W14 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf40bQ80W14 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Prpf40bQ80W14 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.71■□□□□ 0.27
Prpf40bQ80W14 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.71■□□□□ 0.27
Prpf40bQ80W14 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.71■□□□□ 0.27
Prpf40bQ80W14 Gm12091-201ENSMUST00000146791 830 ntBASIC16.71■□□□□ 0.27
Prpf40bQ80W14 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf40bQ80W14 Gm29667-201ENSMUST00000190817 490 ntBASIC16.71■□□□□ 0.27
Prpf40bQ80W14 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf40bQ80W14 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Prpf40bQ80W14 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf40bQ80W14 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf40bQ80W14 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.71■□□□□ 0.27
Prpf40bQ80W14 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Prpf40bQ80W14 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Prpf40bQ80W14 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Prpf40bQ80W14 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Prpf40bQ80W14 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf40bQ80W14 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Prpf40bQ80W14 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Gm27920-201ENSMUST00000183953 96 ntBASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf40bQ80W14 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Gm18018-201ENSMUST00000198273 408 ntBASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Gm43630-201ENSMUST00000201550 776 ntBASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Prpf40bQ80W14 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms