Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nphp3Q7TNH6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nphp3Q7TNH6 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Gm27631-201ENSMUST00000184163 466 ntBASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Dupd1-202ENSMUST00000224735 548 ntBASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nphp3Q7TNH6 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Gm17837-201ENSMUST00000186435 985 ntBASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Gm16476-201ENSMUST00000221544 139 ntBASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nphp3Q7TNH6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Gm45453-201ENSMUST00000211758 853 ntBASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Gm7775-201ENSMUST00000218871 853 ntBASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Gm9063-201ENSMUST00000223299 582 ntBASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp3Q7TNH6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Gm14767-201ENSMUST00000121559 586 ntBASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Shd-206ENSMUST00000225145 998 ntBASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp3Q7TNH6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms