Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.82□□□□□ -0.52
Vma21Q78T54 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vma21Q78T54 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vma21Q78T54 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Vma21Q78T54 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.82□□□□□ -0.52
Vma21Q78T54 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vma21Q78T54 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.81□□□□□ -0.52
Vma21Q78T54 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Vma21Q78T54 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Vma21Q78T54 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Gm24589-201ENSMUST00000116692 94 ntBASIC11.81□□□□□ -0.52
Vma21Q78T54 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Vma21Q78T54 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.81□□□□□ -0.52
Vma21Q78T54 Gm7977-201ENSMUST00000193787 748 ntBASIC11.81□□□□□ -0.52
Vma21Q78T54 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Vma21Q78T54 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
Vma21Q78T54 AV026068-213ENSMUST00000223675 1171 ntBASIC11.81□□□□□ -0.52
Vma21Q78T54 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Vma21Q78T54 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.81□□□□□ -0.52
Vma21Q78T54 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.81□□□□□ -0.52
Vma21Q78T54 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.81□□□□□ -0.52
Vma21Q78T54 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vma21Q78T54 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.81□□□□□ -0.52
Vma21Q78T54 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Vma21Q78T54 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Vma21Q78T54 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.8□□□□□ -0.52
Vma21Q78T54 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.8□□□□□ -0.52
Vma21Q78T54 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.8□□□□□ -0.52
Vma21Q78T54 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.8□□□□□ -0.52
Vma21Q78T54 Gm4899-201ENSMUST00000178708 719 ntBASIC11.8□□□□□ -0.52
Vma21Q78T54 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.8□□□□□ -0.52
Vma21Q78T54 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.8□□□□□ -0.52
Vma21Q78T54 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Vma21Q78T54 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Vma21Q78T54 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.8□□□□□ -0.52
Vma21Q78T54 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Vma21Q78T54 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.8□□□□□ -0.52
Vma21Q78T54 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vma21Q78T54 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Vma21Q78T54 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vma21Q78T54 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms