Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.29□□□□□ -0.12
Scaf4Q6PFF0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Gm18669-201ENSMUST00000216049 778 ntBASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scaf4Q6PFF0 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scaf4Q6PFF0 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.27□□□□□ -0.12
Scaf4Q6PFF0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scaf4Q6PFF0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scaf4Q6PFF0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scaf4Q6PFF0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scaf4Q6PFF0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scaf4Q6PFF0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms