Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn9aQ62205 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn9aQ62205 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn9aQ62205 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn9aQ62205 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn9aQ62205 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.76■□□□□ 0.27
Scn9aQ62205 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn9aQ62205 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn9aQ62205 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn9aQ62205 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn9aQ62205 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn9aQ62205 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn9aQ62205 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn9aQ62205 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn9aQ62205 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn9aQ62205 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn9aQ62205 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn9aQ62205 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn9aQ62205 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn9aQ62205 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn9aQ62205 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn9aQ62205 Gm3961-201ENSMUST00000204425 994 ntBASIC16.75■□□□□ 0.27
Scn9aQ62205 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.75■□□□□ 0.27
Scn9aQ62205 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn9aQ62205 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn9aQ62205 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Scn9aQ62205 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn9aQ62205 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn9aQ62205 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn9aQ62205 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn9aQ62205 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn9aQ62205 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn9aQ62205 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn9aQ62205 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn9aQ62205 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn9aQ62205 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Scn9aQ62205 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn9aQ62205 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Scn9aQ62205 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Scn9aQ62205 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn9aQ62205 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn9aQ62205 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn9aQ62205 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Scn9aQ62205 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Scn9aQ62205 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn9aQ62205 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn9aQ62205 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn9aQ62205 Gm12485-201ENSMUST00000119641 291 ntBASIC16.74■□□□□ 0.27
Scn9aQ62205 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC16.74■□□□□ 0.27
Scn9aQ62205 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC16.74■□□□□ 0.27
Scn9aQ62205 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.74■□□□□ 0.27
Scn9aQ62205 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.74■□□□□ 0.27
Scn9aQ62205 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.74■□□□□ 0.27
Scn9aQ62205 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn9aQ62205 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn9aQ62205 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC16.74■□□□□ 0.27
Scn9aQ62205 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn9aQ62205 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn9aQ62205 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.74■□□□□ 0.27
Scn9aQ62205 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.74■□□□□ 0.27
Scn9aQ62205 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn9aQ62205 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Scn9aQ62205 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn9aQ62205 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn9aQ62205 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Scn9aQ62205 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn9aQ62205 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn9aQ62205 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Scn9aQ62205 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn9aQ62205 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC16.73■□□□□ 0.27
Scn9aQ62205 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn9aQ62205 Gm38002-201ENSMUST00000193255 180 ntBASIC16.73■□□□□ 0.27
Scn9aQ62205 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC16.73■□□□□ 0.27
Scn9aQ62205 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn9aQ62205 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn9aQ62205 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn9aQ62205 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn9aQ62205 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn9aQ62205 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Scn9aQ62205 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn9aQ62205 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC16.73■□□□□ 0.27
Scn9aQ62205 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn9aQ62205 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn9aQ62205 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Scn9aQ62205 Gm7584-201ENSMUST00000175829 940 ntBASIC16.73■□□□□ 0.27
Scn9aQ62205 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.73■□□□□ 0.27
Scn9aQ62205 Gm37714-201ENSMUST00000194742 342 ntBASIC16.73■□□□□ 0.27
Scn9aQ62205 Gm18056-201ENSMUST00000207670 568 ntBASIC16.73■□□□□ 0.27
Scn9aQ62205 Gm18061-201ENSMUST00000208350 562 ntBASIC16.73■□□□□ 0.27
Scn9aQ62205 Gm18063-201ENSMUST00000208529 568 ntBASIC16.73■□□□□ 0.27
Scn9aQ62205 Gm18052-201ENSMUST00000208750 559 ntBASIC16.73■□□□□ 0.27
Scn9aQ62205 Gm19309-201ENSMUST00000218295 205 ntBASIC16.73■□□□□ 0.27
Scn9aQ62205 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn9aQ62205 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn9aQ62205 Mir497b-201ENSMUST00000093601 125 ntBASIC16.73■□□□□ 0.27
Scn9aQ62205 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn9aQ62205 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn9aQ62205 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn9aQ62205 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn9aQ62205 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms