Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Foxc1Q61572 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC10.73□□□□□ -0.69
Foxc1Q61572 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC10.73□□□□□ -0.69
Foxc1Q61572 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Foxc1Q61572 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Foxc1Q61572 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC10.73□□□□□ -0.69
Foxc1Q61572 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC10.73□□□□□ -0.69
Foxc1Q61572 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC10.73□□□□□ -0.69
Foxc1Q61572 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC10.73□□□□□ -0.69
Foxc1Q61572 Gm2272-201ENSMUST00000194903 582 ntBASIC10.73□□□□□ -0.69
Foxc1Q61572 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC10.73□□□□□ -0.69
Foxc1Q61572 Gm44945-201ENSMUST00000206764 1187 ntBASIC10.73□□□□□ -0.69
Foxc1Q61572 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Gm15500-202ENSMUST00000071641 1019 ntBASIC10.73□□□□□ -0.69
Foxc1Q61572 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Foxc1Q61572 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC10.73□□□□□ -0.69
Foxc1Q61572 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Foxc1Q61572 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Foxc1Q61572 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Foxc1Q61572 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Foxc1Q61572 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC10.72□□□□□ -0.69
Foxc1Q61572 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Foxc1Q61572 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Foxc1Q61572 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC10.72□□□□□ -0.69
Foxc1Q61572 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Foxc1Q61572 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Foxc1Q61572 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Foxc1Q61572 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Gm13597-201ENSMUST00000121239 375 ntBASIC10.72□□□□□ -0.69
Foxc1Q61572 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC10.72□□□□□ -0.69
Foxc1Q61572 Gm27301-201ENSMUST00000184012 127 ntBASIC10.72□□□□□ -0.69
Foxc1Q61572 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC10.72□□□□□ -0.69
Foxc1Q61572 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC10.72□□□□□ -0.69
Foxc1Q61572 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.72□□□□□ -0.69
Foxc1Q61572 Thap2-203ENSMUST00000218989 527 ntBASIC10.72□□□□□ -0.69
Foxc1Q61572 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Foxc1Q61572 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Foxc1Q61572 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Foxc1Q61572 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Foxc1Q61572 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.72□□□□□ -0.69
Foxc1Q61572 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Foxc1Q61572 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Foxc1Q61572 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms