Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.05■□□□□ 0.16
Ift88Q61371 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ift88Q61371 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ift88Q61371 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.05■□□□□ 0.16
Ift88Q61371 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ift88Q61371 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ift88Q61371 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.05■□□□□ 0.16
Ift88Q61371 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ift88Q61371 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ift88Q61371 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ift88Q61371 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ift88Q61371 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ift88Q61371 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ift88Q61371 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ift88Q61371 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.04■□□□□ 0.16
Ift88Q61371 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ift88Q61371 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ift88Q61371 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.04■□□□□ 0.16
Ift88Q61371 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ift88Q61371 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ift88Q61371 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ift88Q61371 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ift88Q61371 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ift88Q61371 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ift88Q61371 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ift88Q61371 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ift88Q61371 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ift88Q61371 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ift88Q61371 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ift88Q61371 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ift88Q61371 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.04■□□□□ 0.16
Ift88Q61371 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ift88Q61371 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Ift88Q61371 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.04■□□□□ 0.16
Ift88Q61371 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.04■□□□□ 0.16
Ift88Q61371 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.03■□□□□ 0.16
Ift88Q61371 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ift88Q61371 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ift88Q61371 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ift88Q61371 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ift88Q61371 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ift88Q61371 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ift88Q61371 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
Ift88Q61371 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Ift88Q61371 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.03■□□□□ 0.16
Ift88Q61371 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.03■□□□□ 0.16
Ift88Q61371 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ift88Q61371 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ift88Q61371 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.03■□□□□ 0.16
Ift88Q61371 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ift88Q61371 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ift88Q61371 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ift88Q61371 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ift88Q61371 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ift88Q61371 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ift88Q61371 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ift88Q61371 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ift88Q61371 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ift88Q61371 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ift88Q61371 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ift88Q61371 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ift88Q61371 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ift88Q61371 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ift88Q61371 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ift88Q61371 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ift88Q61371 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.02■□□□□ 0.16
Ift88Q61371 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ift88Q61371 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.02■□□□□ 0.16
Ift88Q61371 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ift88Q61371 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.02■□□□□ 0.16
Ift88Q61371 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ift88Q61371 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.02■□□□□ 0.16
Ift88Q61371 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.02■□□□□ 0.16
Ift88Q61371 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ift88Q61371 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.02■□□□□ 0.16
Ift88Q61371 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ift88Q61371 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.02■□□□□ 0.16
Ift88Q61371 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.02■□□□□ 0.15
Ift88Q61371 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ift88Q61371 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ift88Q61371 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ift88Q61371 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ift88Q61371 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ift88Q61371 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ift88Q61371 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ift88Q61371 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.01■□□□□ 0.15
Ift88Q61371 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.01■□□□□ 0.15
Ift88Q61371 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ift88Q61371 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ift88Q61371 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ift88Q61371 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
Ift88Q61371 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ift88Q61371 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ift88Q61371 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ift88Q61371 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ift88Q61371 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ift88Q61371 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ift88Q61371 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.01■□□□□ 0.15
Ift88Q61371 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ift88Q61371 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms