Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Vps54Q5SPW0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Vps54Q5SPW0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Vps54Q5SPW0 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.38■□□□□ 0.37
Vps54Q5SPW0 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.37■□□□□ 0.37
Vps54Q5SPW0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Gm24543-201ENSMUST00000103867 82 ntBASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Vps54Q5SPW0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Gm12428-201ENSMUST00000119844 727 ntBASIC17.36■□□□□ 0.37
Vps54Q5SPW0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Gm23547-201ENSMUST00000158210 271 ntBASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Dupd1-202ENSMUST00000224735 548 ntBASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Shd-206ENSMUST00000225145 998 ntBASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.36■□□□□ 0.37
Vps54Q5SPW0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Gm14042-201ENSMUST00000120139 833 ntBASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Gm20949-201ENSMUST00000206478 952 ntBASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Gm45453-201ENSMUST00000211758 853 ntBASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vps54Q5SPW0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms