Protein–RNA interactions for Protein: Q3ULF4

Spg7, Paraplegin, mousemouse

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg7Q3ULF4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Spg7Q3ULF4 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Spg7Q3ULF4 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Spg7Q3ULF4 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Spg7Q3ULF4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Spg7Q3ULF4 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Gm6473-201ENSMUST00000188572 1210 ntBASIC17.2■□□□□ 0.34
Spg7Q3ULF4 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Spg7Q3ULF4 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.2■□□□□ 0.34
Spg7Q3ULF4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Spg7Q3ULF4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Spg7Q3ULF4 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Spg7Q3ULF4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Spg7Q3ULF4 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Spg7Q3ULF4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.19■□□□□ 0.34
Spg7Q3ULF4 Gm21854-201ENSMUST00000179901 471 ntBASIC17.19■□□□□ 0.34
Spg7Q3ULF4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Spg7Q3ULF4 Gm9794-201ENSMUST00000202370 423 ntBASIC17.19■□□□□ 0.34
Spg7Q3ULF4 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.19■□□□□ 0.34
Spg7Q3ULF4 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Spg7Q3ULF4 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Spg7Q3ULF4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Spg7Q3ULF4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Spg7Q3ULF4 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Spg7Q3ULF4 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Spg7Q3ULF4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Spg7Q3ULF4 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Spg7Q3ULF4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Spg7Q3ULF4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Spg7Q3ULF4 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Spg7Q3ULF4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Gm9797-201ENSMUST00000052902 613 ntBASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Spg7Q3ULF4 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Spg7Q3ULF4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.17■□□□□ 0.34
Spg7Q3ULF4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Spg7Q3ULF4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Spg7Q3ULF4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Spg7Q3ULF4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Spg7Q3ULF4 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.17■□□□□ 0.34
Spg7Q3ULF4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.17■□□□□ 0.34
Spg7Q3ULF4 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Spg7Q3ULF4 Gm15957-201ENSMUST00000118893 974 ntBASIC17.17■□□□□ 0.34
Spg7Q3ULF4 Gm14928-201ENSMUST00000120198 477 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms