Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Brf2Q3UAW9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Gm15427-201ENSMUST00000117288 531 ntBASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brf2Q3UAW9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brf2Q3UAW9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brf2Q3UAW9 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms