Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cul4aQ3TCH7 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Gm45098-201ENSMUST00000207179 657 ntBASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Gm10819-201ENSMUST00000099988 561 ntBASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cul4aQ3TCH7 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cul4aQ3TCH7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cul4aQ3TCH7 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cul4aQ3TCH7 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cul4aQ3TCH7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cul4aQ3TCH7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cul4aQ3TCH7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Gm5479-201ENSMUST00000160578 435 ntBASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cul4aQ3TCH7 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cul4aQ3TCH7 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cul4aQ3TCH7 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cul4aQ3TCH7 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.19■□□□□ 0.02
Cul4aQ3TCH7 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cul4aQ3TCH7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Cul4aQ3TCH7 Gm27301-201ENSMUST00000184012 127 ntBASIC15.19■□□□□ 0.02
Cul4aQ3TCH7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.19■□□□□ 0.02
Cul4aQ3TCH7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.19■□□□□ 0.02
Cul4aQ3TCH7 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cul4aQ3TCH7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cul4aQ3TCH7 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cul4aQ3TCH7 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.19■□□□□ 0.02
Cul4aQ3TCH7 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cul4aQ3TCH7 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cul4aQ3TCH7 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cul4aQ3TCH7 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cul4aQ3TCH7 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cul4aQ3TCH7 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cul4aQ3TCH7 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
Cul4aQ3TCH7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cul4aQ3TCH7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms