Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Nhej1Q3KNJ2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Nhej1Q3KNJ2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Nhej1Q3KNJ2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nhej1Q3KNJ2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Gm11452-201ENSMUST00000122376 690 ntBASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Gm27300-201ENSMUST00000184085 97 ntBASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Gm27335-201ENSMUST00000184758 97 ntBASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Nhej1Q3KNJ2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nhej1Q3KNJ2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nhej1Q3KNJ2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nhej1Q3KNJ2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nhej1Q3KNJ2 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.43■□□□□ 0.06
Nhej1Q3KNJ2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nhej1Q3KNJ2 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nhej1Q3KNJ2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nhej1Q3KNJ2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nhej1Q3KNJ2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nhej1Q3KNJ2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Nhej1Q3KNJ2 Gm16026-204ENSMUST00000162652 683 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms