Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Gm12882-201ENSMUST00000121696 517 ntBASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Gm8810-201ENSMUST00000172895 754 ntBASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Gm6334-201ENSMUST00000207083 228 ntBASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col19a1Q0VF58 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Gm15957-201ENSMUST00000118893 974 ntBASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Gm38341-201ENSMUST00000195357 515 ntBASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.28■□□□□ 0.04
Col19a1Q0VF58 AC155637.1-201ENSMUST00000218560 636 ntBASIC15.28■□□□□ 0.04
Col19a1Q0VF58 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.28■□□□□ 0.04
Col19a1Q0VF58 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Mir433-201ENSMUST00000093564 124 ntBASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col19a1Q0VF58 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col19a1Q0VF58 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col19a1Q0VF58 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.27■□□□□ 0.04
Col19a1Q0VF58 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col19a1Q0VF58 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col19a1Q0VF58 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col19a1Q0VF58 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col19a1Q0VF58 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col19a1Q0VF58 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Col19a1Q0VF58 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col19a1Q0VF58 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Col19a1Q0VF58 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Col19a1Q0VF58 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC15.27■□□□□ 0.04
Col19a1Q0VF58 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.27■□□□□ 0.04
Col19a1Q0VF58 Gm27331-201ENSMUST00000183705 60 ntBASIC15.27■□□□□ 0.04
Col19a1Q0VF58 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.27■□□□□ 0.04
Col19a1Q0VF58 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.27■□□□□ 0.04
Col19a1Q0VF58 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.27■□□□□ 0.04
Col19a1Q0VF58 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.27■□□□□ 0.04
Col19a1Q0VF58 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Col19a1Q0VF58 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col19a1Q0VF58 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Col19a1Q0VF58 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col19a1Q0VF58 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Col19a1Q0VF58 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col19a1Q0VF58 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col19a1Q0VF58 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col19a1Q0VF58 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col19a1Q0VF58 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms