Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.25□□□□□ -0.29
Scn1bP97952 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scn1bP97952 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.25□□□□□ -0.29
Scn1bP97952 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn1bP97952 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Scn1bP97952 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Scn1bP97952 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Scn1bP97952 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.24□□□□□ -0.29
Scn1bP97952 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.24□□□□□ -0.29
Scn1bP97952 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.24□□□□□ -0.29
Scn1bP97952 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Scn1bP97952 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Scn1bP97952 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.24□□□□□ -0.29
Scn1bP97952 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Scn1bP97952 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scn1bP97952 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Scn1bP97952 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.23□□□□□ -0.29
Scn1bP97952 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Scn1bP97952 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.23□□□□□ -0.29
Scn1bP97952 Gm19164-201ENSMUST00000210667 640 ntBASIC13.23□□□□□ -0.29
Scn1bP97952 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.23□□□□□ -0.29
Scn1bP97952 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Scn1bP97952 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Scn1bP97952 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Scn1bP97952 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Scn1bP97952 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scn1bP97952 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scn1bP97952 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Scn1bP97952 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms