Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
IhhP97812 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IhhP97812 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IhhP97812 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IhhP97812 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
IhhP97812 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
IhhP97812 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
IhhP97812 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.97□□□□□ -0.01
IhhP97812 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.97□□□□□ -0.01
IhhP97812 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.97□□□□□ -0.01
IhhP97812 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.97□□□□□ -0.01
IhhP97812 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
IhhP97812 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IhhP97812 Gm6916-202ENSMUST00000205523 195 ntBASIC14.97□□□□□ -0.01
IhhP97812 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.97□□□□□ -0.01
IhhP97812 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.97□□□□□ -0.01
IhhP97812 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IhhP97812 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IhhP97812 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
IhhP97812 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IhhP97812 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.97□□□□□ -0.01
IhhP97812 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.97□□□□□ -0.01
IhhP97812 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
IhhP97812 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
IhhP97812 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IhhP97812 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
IhhP97812 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IhhP97812 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
IhhP97812 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
IhhP97812 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IhhP97812 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IhhP97812 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
IhhP97812 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IhhP97812 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.96□□□□□ -0.01
IhhP97812 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IhhP97812 Gm15653-201ENSMUST00000119247 907 ntBASIC14.96□□□□□ -0.01
IhhP97812 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.96□□□□□ -0.01
IhhP97812 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
IhhP97812 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
IhhP97812 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.96□□□□□ -0.01
IhhP97812 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.96□□□□□ -0.01
IhhP97812 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
IhhP97812 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
IhhP97812 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
IhhP97812 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
IhhP97812 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IhhP97812 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
IhhP97812 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
IhhP97812 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
IhhP97812 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
IhhP97812 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
IhhP97812 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
IhhP97812 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
IhhP97812 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
IhhP97812 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
IhhP97812 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
IhhP97812 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
IhhP97812 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.95□□□□□ -0.02
IhhP97812 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.95□□□□□ -0.02
IhhP97812 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.95□□□□□ -0.02
IhhP97812 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
IhhP97812 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Gm15957-201ENSMUST00000118893 974 ntBASIC14.95□□□□□ -0.02
IhhP97812 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.95□□□□□ -0.02
IhhP97812 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
IhhP97812 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
IhhP97812 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.95□□□□□ -0.02
IhhP97812 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
IhhP97812 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.95□□□□□ -0.02
IhhP97812 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
IhhP97812 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
IhhP97812 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.95□□□□□ -0.02
IhhP97812 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IhhP97812 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IhhP97812 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
IhhP97812 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.94□□□□□ -0.02
IhhP97812 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
IhhP97812 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms