Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd3P97770 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.77□□□□□ -0.05
Thumpd3P97770 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd3P97770 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd3P97770 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.77□□□□□ -0.05
Thumpd3P97770 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd3P97770 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd3P97770 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Thumpd3P97770 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Thumpd3P97770 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Thumpd3P97770 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
Thumpd3P97770 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.76□□□□□ -0.05
Thumpd3P97770 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.76□□□□□ -0.05
Thumpd3P97770 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.76□□□□□ -0.05
Thumpd3P97770 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.76□□□□□ -0.05
Thumpd3P97770 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.76□□□□□ -0.05
Thumpd3P97770 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Thumpd3P97770 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Thumpd3P97770 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd3P97770 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd3P97770 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd3P97770 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd3P97770 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd3P97770 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd3P97770 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd3P97770 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.75□□□□□ -0.05
Thumpd3P97770 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd3P97770 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd3P97770 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Thumpd3P97770 Gm4995-201ENSMUST00000117247 432 ntBASIC14.75□□□□□ -0.05
Thumpd3P97770 Mir3113-201ENSMUST00000175478 76 ntBASIC14.75□□□□□ -0.05
Thumpd3P97770 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Thumpd3P97770 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd3P97770 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd3P97770 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.75□□□□□ -0.05
Thumpd3P97770 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd3P97770 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Thumpd3P97770 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.75□□□□□ -0.05
Thumpd3P97770 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd3P97770 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Thumpd3P97770 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Thumpd3P97770 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd3P97770 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd3P97770 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd3P97770 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Thumpd3P97770 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd3P97770 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd3P97770 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Thumpd3P97770 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.74□□□□□ -0.05
Thumpd3P97770 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.74□□□□□ -0.05
Thumpd3P97770 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Thumpd3P97770 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Thumpd3P97770 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Thumpd3P97770 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Thumpd3P97770 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Thumpd3P97770 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Thumpd3P97770 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Thumpd3P97770 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.74□□□□□ -0.05
Thumpd3P97770 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Thumpd3P97770 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.74□□□□□ -0.05
Thumpd3P97770 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Thumpd3P97770 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.74□□□□□ -0.05
Thumpd3P97770 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
Thumpd3P97770 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.74□□□□□ -0.05
Thumpd3P97770 Gm7787-201ENSMUST00000216858 688 ntBASIC14.74□□□□□ -0.05
Thumpd3P97770 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Thumpd3P97770 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Thumpd3P97770 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Thumpd3P97770 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Thumpd3P97770 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Thumpd3P97770 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Thumpd3P97770 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Thumpd3P97770 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Thumpd3P97770 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Thumpd3P97770 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Thumpd3P97770 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.73□□□□□ -0.05
Thumpd3P97770 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Thumpd3P97770 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Thumpd3P97770 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms