Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Nkx2-3P97334 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-3P97334 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-3P97334 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-3P97334 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC18.09■□□□□ 0.49
Nkx2-3P97334 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC18.09■□□□□ 0.49
Nkx2-3P97334 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC18.09■□□□□ 0.49
Nkx2-3P97334 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-3P97334 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-3P97334 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC18.09■□□□□ 0.49
Nkx2-3P97334 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.09■□□□□ 0.49
Nkx2-3P97334 Gm37714-201ENSMUST00000194742 342 ntBASIC18.09■□□□□ 0.49
Nkx2-3P97334 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC18.09■□□□□ 0.49
Nkx2-3P97334 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.09■□□□□ 0.49
Nkx2-3P97334 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-3P97334 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-3P97334 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-3P97334 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Nkx2-3P97334 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-3P97334 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-3P97334 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx2-3P97334 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx2-3P97334 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx2-3P97334 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx2-3P97334 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx2-3P97334 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx2-3P97334 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx2-3P97334 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx2-3P97334 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx2-3P97334 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx2-3P97334 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx2-3P97334 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.08■□□□□ 0.48
Nkx2-3P97334 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC18.08■□□□□ 0.48
Nkx2-3P97334 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx2-3P97334 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Nkx2-3P97334 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx2-3P97334 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC18.08■□□□□ 0.48
Nkx2-3P97334 Gm7067-201ENSMUST00000207698 1249 ntBASIC18.08■□□□□ 0.48
Nkx2-3P97334 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx2-3P97334 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.08■□□□□ 0.48
Nkx2-3P97334 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx2-3P97334 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx2-3P97334 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx2-3P97334 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx2-3P97334 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Gm2495-201ENSMUST00000191160 466 ntBASIC18.07■□□□□ 0.48
Nkx2-3P97334 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-3P97334 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx2-3P97334 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx2-3P97334 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx2-3P97334 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC18.06■□□□□ 0.48
Nkx2-3P97334 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx2-3P97334 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx2-3P97334 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
Nkx2-3P97334 Gm15376-201ENSMUST00000122258 783 ntBASIC18.06■□□□□ 0.48
Nkx2-3P97334 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Nkx2-3P97334 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC18.06■□□□□ 0.48
Nkx2-3P97334 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC18.06■□□□□ 0.48
Nkx2-3P97334 Ighv8-14-201ENSMUST00000196781 358 ntBASIC18.06■□□□□ 0.48
Nkx2-3P97334 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC18.06■□□□□ 0.48
Nkx2-3P97334 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx2-3P97334 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx2-3P97334 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Nkx2-3P97334 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx2-3P97334 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Nkx2-3P97334 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx2-3P97334 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx2-3P97334 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Ssr1-204ENSMUST00000225319 1610 ntBASIC18.05■□□□□ 0.48
Nkx2-3P97334 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx2-3P97334 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms