Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CiitaP79621 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.68■□□□□ 0.1
CiitaP79621 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CiitaP79621 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CiitaP79621 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CiitaP79621 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CiitaP79621 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CiitaP79621 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CiitaP79621 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CiitaP79621 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CiitaP79621 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CiitaP79621 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CiitaP79621 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CiitaP79621 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.68■□□□□ 0.1
CiitaP79621 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.68■□□□□ 0.1
CiitaP79621 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CiitaP79621 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CiitaP79621 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CiitaP79621 Mir125a-201ENSMUST00000083545 68 ntBASIC15.68■□□□□ 0.1
CiitaP79621 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CiitaP79621 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CiitaP79621 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CiitaP79621 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CiitaP79621 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CiitaP79621 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CiitaP79621 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CiitaP79621 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CiitaP79621 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CiitaP79621 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CiitaP79621 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CiitaP79621 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CiitaP79621 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CiitaP79621 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CiitaP79621 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CiitaP79621 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CiitaP79621 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CiitaP79621 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CiitaP79621 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CiitaP79621 Gm14719-201ENSMUST00000121891 340 ntBASIC15.67■□□□□ 0.1
CiitaP79621 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.67■□□□□ 0.1
CiitaP79621 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.67■□□□□ 0.1
CiitaP79621 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CiitaP79621 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.67■□□□□ 0.1
CiitaP79621 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.67■□□□□ 0.1
CiitaP79621 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.67■□□□□ 0.1
CiitaP79621 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CiitaP79621 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.67■□□□□ 0.1
CiitaP79621 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CiitaP79621 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CiitaP79621 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CiitaP79621 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CiitaP79621 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.67■□□□□ 0.1
CiitaP79621 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.67■□□□□ 0.1
CiitaP79621 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CiitaP79621 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CiitaP79621 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CiitaP79621 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CiitaP79621 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CiitaP79621 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CiitaP79621 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CiitaP79621 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CiitaP79621 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CiitaP79621 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CiitaP79621 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CiitaP79621 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.66■□□□□ 0.1
CiitaP79621 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CiitaP79621 Gm12882-201ENSMUST00000121696 517 ntBASIC15.66■□□□□ 0.1
CiitaP79621 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.66■□□□□ 0.1
CiitaP79621 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CiitaP79621 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CiitaP79621 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CiitaP79621 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CiitaP79621 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CiitaP79621 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CiitaP79621 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CiitaP79621 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CiitaP79621 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CiitaP79621 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CiitaP79621 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CiitaP79621 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CiitaP79621 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CiitaP79621 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.66■□□□□ 0.1
CiitaP79621 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CiitaP79621 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CiitaP79621 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.65■□□□□ 0.1
CiitaP79621 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CiitaP79621 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CiitaP79621 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.65■□□□□ 0.1
CiitaP79621 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CiitaP79621 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.65■□□□□ 0.1
CiitaP79621 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.65■□□□□ 0.1
CiitaP79621 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CiitaP79621 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CiitaP79621 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.65■□□□□ 0.1
CiitaP79621 Gm27437-201ENSMUST00000183429 107 ntBASIC15.65■□□□□ 0.1
CiitaP79621 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.65■□□□□ 0.1
CiitaP79621 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.65■□□□□ 0.1
CiitaP79621 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CiitaP79621 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CiitaP79621 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms