Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Shox2P70390 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.32□□□□□ -0.12
Shox2P70390 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.32□□□□□ -0.12
Shox2P70390 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Shox2P70390 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shox2P70390 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.31□□□□□ -0.12
Shox2P70390 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Shox2P70390 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.31□□□□□ -0.12
Shox2P70390 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.31□□□□□ -0.12
Shox2P70390 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.31□□□□□ -0.12
Shox2P70390 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.31□□□□□ -0.12
Shox2P70390 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Shox2P70390 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shox2P70390 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shox2P70390 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.3□□□□□ -0.12
Shox2P70390 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.3□□□□□ -0.12
Shox2P70390 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shox2P70390 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Shox2P70390 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shox2P70390 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shox2P70390 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Shox2P70390 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shox2P70390 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shox2P70390 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shox2P70390 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shox2P70390 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shox2P70390 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shox2P70390 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shox2P70390 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.3□□□□□ -0.12
Shox2P70390 Gm45328-201ENSMUST00000210942 917 ntBASIC14.3□□□□□ -0.12
Shox2P70390 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Shox2P70390 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Shox2P70390 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shox2P70390 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shox2P70390 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shox2P70390 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shox2P70390 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shox2P70390 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shox2P70390 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Shox2P70390 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shox2P70390 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.29□□□□□ -0.12
Shox2P70390 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.29□□□□□ -0.12
Shox2P70390 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Shox2P70390 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.29□□□□□ -0.12
Shox2P70390 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.29□□□□□ -0.12
Shox2P70390 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.29□□□□□ -0.12
Shox2P70390 Gm8655-201ENSMUST00000221159 852 ntBASIC14.29□□□□□ -0.12
Shox2P70390 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.29□□□□□ -0.12
Shox2P70390 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Shox2P70390 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms