Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Sec61a1P61620 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
Sec61a1P61620 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sec61a1P61620 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Sec61a1P61620 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Gm12008-201ENSMUST00000117791 755 ntBASIC12.78□□□□□ -0.36
Sec61a1P61620 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.78□□□□□ -0.36
Sec61a1P61620 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sec61a1P61620 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sec61a1P61620 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.78□□□□□ -0.36
Sec61a1P61620 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.78□□□□□ -0.36
Sec61a1P61620 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.78□□□□□ -0.36
Sec61a1P61620 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.78□□□□□ -0.36
Sec61a1P61620 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.78□□□□□ -0.36
Sec61a1P61620 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sec61a1P61620 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Sec61a1P61620 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sec61a1P61620 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sec61a1P61620 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.78□□□□□ -0.36
Sec61a1P61620 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sec61a1P61620 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Sec61a1P61620 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sec61a1P61620 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Sec61a1P61620 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.77□□□□□ -0.37
Sec61a1P61620 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Gm15467-201ENSMUST00000120582 445 ntBASIC12.77□□□□□ -0.37
Sec61a1P61620 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Sec61a1P61620 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Gm9727-201ENSMUST00000161387 555 ntBASIC12.77□□□□□ -0.37
Sec61a1P61620 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.77□□□□□ -0.37
Sec61a1P61620 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.77□□□□□ -0.37
Sec61a1P61620 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.77□□□□□ -0.37
Sec61a1P61620 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.77□□□□□ -0.37
Sec61a1P61620 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.77□□□□□ -0.37
Sec61a1P61620 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Sec61a1P61620 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Sec61a1P61620 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Sec61a1P61620 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.77□□□□□ -0.37
Sec61a1P61620 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.77□□□□□ -0.37
Sec61a1P61620 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sec61a1P61620 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Sec61a1P61620 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms