Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ube2d3P61079 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ube2d3P61079 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ube2d3P61079 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Ube2d3P61079 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube2d3P61079 Gm5366-201ENSMUST00000215494 1338 ntBASIC10.38□□□□□ -0.75
Ube2d3P61079 AC119177.1-201ENSMUST00000227647 1332 ntBASIC10.38□□□□□ -0.75
Ube2d3P61079 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC10.38□□□□□ -0.75
Ube2d3P61079 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube2d3P61079 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube2d3P61079 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube2d3P61079 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Ube2d3P61079 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube2d3P61079 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube2d3P61079 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube2d3P61079 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube2d3P61079 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC10.38□□□□□ -0.75
Ube2d3P61079 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ube2d3P61079 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.38□□□□□ -0.75
Ube2d3P61079 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC10.38□□□□□ -0.75
Ube2d3P61079 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube2d3P61079 Gm43935-201ENSMUST00000203569 1050 ntBASIC10.38□□□□□ -0.75
Ube2d3P61079 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC10.38□□□□□ -0.75
Ube2d3P61079 Gm10060-201ENSMUST00000212002 111 ntBASIC10.38□□□□□ -0.75
Ube2d3P61079 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC10.38□□□□□ -0.75
Ube2d3P61079 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.38□□□□□ -0.75
Ube2d3P61079 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ube2d3P61079 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ube2d3P61079 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Ube2d3P61079 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ube2d3P61079 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Ube2d3P61079 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube2d3P61079 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ube2d3P61079 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube2d3P61079 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube2d3P61079 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube2d3P61079 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube2d3P61079 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube2d3P61079 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube2d3P61079 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube2d3P61079 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ube2d3P61079 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC10.38□□□□□ -0.75
Ube2d3P61079 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Ube2d3P61079 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ube2d3P61079 Gm44645-201ENSMUST00000205492 1653 ntBASIC10.38□□□□□ -0.75
Ube2d3P61079 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Ube2d3P61079 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ube2d3P61079 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Gm7153-201ENSMUST00000117092 455 ntBASIC10.37□□□□□ -0.75
Ube2d3P61079 Gm15593-201ENSMUST00000122085 1008 ntBASIC10.37□□□□□ -0.75
Ube2d3P61079 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC10.37□□□□□ -0.75
Ube2d3P61079 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC10.37□□□□□ -0.75
Ube2d3P61079 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ube2d3P61079 Gm4899-201ENSMUST00000178708 719 ntBASIC10.37□□□□□ -0.75
Ube2d3P61079 Gm17971-201ENSMUST00000190239 806 ntBASIC10.37□□□□□ -0.75
Ube2d3P61079 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Gm10459-201ENSMUST00000202708 1155 ntBASIC10.37□□□□□ -0.75
Ube2d3P61079 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC10.37□□□□□ -0.75
Ube2d3P61079 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Ube2d3P61079 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Rubie-203ENSMUST00000227803 2430 ntBASIC10.37□□□□□ -0.75
Ube2d3P61079 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ube2d3P61079 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Ube2d3P61079 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Ube2d3P61079 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ube2d3P61079 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ube2d3P61079 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms