Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.85□□□□□ -0.35
Sf3b6P59708 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
Sf3b6P59708 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sf3b6P59708 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.84□□□□□ -0.35
Sf3b6P59708 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Gm14042-201ENSMUST00000120139 833 ntBASIC12.84□□□□□ -0.35
Sf3b6P59708 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.84□□□□□ -0.35
Sf3b6P59708 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.84□□□□□ -0.35
Sf3b6P59708 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.84□□□□□ -0.35
Sf3b6P59708 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.84□□□□□ -0.35
Sf3b6P59708 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.84□□□□□ -0.35
Sf3b6P59708 Mzt1-203ENSMUST00000227948 952 ntBASIC12.84□□□□□ -0.35
Sf3b6P59708 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.84□□□□□ -0.35
Sf3b6P59708 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Sf3b6P59708 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sf3b6P59708 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sf3b6P59708 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Sf3b6P59708 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sf3b6P59708 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sf3b6P59708 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sf3b6P59708 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Sf3b6P59708 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sf3b6P59708 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Sf3b6P59708 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.83□□□□□ -0.36
Sf3b6P59708 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sf3b6P59708 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sf3b6P59708 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.83□□□□□ -0.36
Sf3b6P59708 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.83□□□□□ -0.36
Sf3b6P59708 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Sf3b6P59708 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sf3b6P59708 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.83□□□□□ -0.36
Sf3b6P59708 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sf3b6P59708 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sf3b6P59708 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Sf3b6P59708 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sf3b6P59708 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.82□□□□□ -0.36
Sf3b6P59708 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.82□□□□□ -0.36
Sf3b6P59708 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms