Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.34■□□□□ 0.21
Rrp1P56183 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.34■□□□□ 0.21
Rrp1P56183 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.34■□□□□ 0.21
Rrp1P56183 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rrp1P56183 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rrp1P56183 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.34■□□□□ 0.21
Rrp1P56183 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rrp1P56183 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rrp1P56183 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rrp1P56183 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rrp1P56183 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rrp1P56183 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.34■□□□□ 0.21
Rrp1P56183 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rrp1P56183 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rrp1P56183 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rrp1P56183 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rrp1P56183 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rrp1P56183 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.33■□□□□ 0.21
Rrp1P56183 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rrp1P56183 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rrp1P56183 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rrp1P56183 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.33■□□□□ 0.2
Rrp1P56183 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rrp1P56183 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rrp1P56183 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rrp1P56183 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.33■□□□□ 0.2
Rrp1P56183 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rrp1P56183 Gm2272-201ENSMUST00000194903 582 ntBASIC16.33■□□□□ 0.2
Rrp1P56183 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rrp1P56183 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.33■□□□□ 0.2
Rrp1P56183 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rrp1P56183 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.33■□□□□ 0.2
Rrp1P56183 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.33■□□□□ 0.2
Rrp1P56183 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rrp1P56183 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rrp1P56183 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.33■□□□□ 0.2
Rrp1P56183 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rrp1P56183 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rrp1P56183 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.33■□□□□ 0.2
Rrp1P56183 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.33■□□□□ 0.2
Rrp1P56183 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rrp1P56183 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rrp1P56183 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rrp1P56183 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rrp1P56183 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrp1P56183 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrp1P56183 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrp1P56183 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rrp1P56183 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rrp1P56183 Gm13036-201ENSMUST00000117799 748 ntBASIC16.32■□□□□ 0.2
Rrp1P56183 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrp1P56183 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rrp1P56183 Gm27300-201ENSMUST00000184085 97 ntBASIC16.32■□□□□ 0.2
Rrp1P56183 Gm27335-201ENSMUST00000184758 97 ntBASIC16.32■□□□□ 0.2
Rrp1P56183 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.32■□□□□ 0.2
Rrp1P56183 Gm10060-201ENSMUST00000212002 111 ntBASIC16.32■□□□□ 0.2
Rrp1P56183 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrp1P56183 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrp1P56183 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrp1P56183 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrp1P56183 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrp1P56183 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrp1P56183 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrp1P56183 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrp1P56183 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrp1P56183 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rrp1P56183 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrp1P56183 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rrp1P56183 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp1P56183 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Rrp1P56183 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp1P56183 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp1P56183 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp1P56183 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp1P56183 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp1P56183 Gm13597-201ENSMUST00000121239 375 ntBASIC16.31■□□□□ 0.2
Rrp1P56183 Gm16026-204ENSMUST00000162652 683 ntBASIC16.31■□□□□ 0.2
Rrp1P56183 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.31■□□□□ 0.2
Rrp1P56183 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp1P56183 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.31■□□□□ 0.2
Rrp1P56183 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp1P56183 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp1P56183 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp1P56183 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
Rrp1P56183 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp1P56183 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp1P56183 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp1P56183 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp1P56183 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp1P56183 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp1P56183 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rrp1P56183 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp1P56183 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp1P56183 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
Rrp1P56183 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.3■□□□□ 0.2
Rrp1P56183 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp1P56183 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp1P56183 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp1P56183 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rrp1P56183 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms