Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Atxn1P54254 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.37□□□□□ -0.11
Atxn1P54254 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.37□□□□□ -0.11
Atxn1P54254 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 Gm12742-201ENSMUST00000117326 410 ntBASIC14.37□□□□□ -0.11
Atxn1P54254 Gm15806-201ENSMUST00000120696 955 ntBASIC14.37□□□□□ -0.11
Atxn1P54254 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.37□□□□□ -0.11
Atxn1P54254 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.37□□□□□ -0.11
Atxn1P54254 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Atxn1P54254 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Atxn1P54254 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.37□□□□□ -0.11
Atxn1P54254 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atxn1P54254 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Atxn1P54254 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Atxn1P54254 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.36□□□□□ -0.11
Atxn1P54254 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Atxn1P54254 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Atxn1P54254 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.36□□□□□ -0.11
Atxn1P54254 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.36□□□□□ -0.11
Atxn1P54254 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Gm9719-201ENSMUST00000162765 543 ntBASIC14.36□□□□□ -0.11
Atxn1P54254 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.36□□□□□ -0.11
Atxn1P54254 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.36□□□□□ -0.11
Atxn1P54254 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.36□□□□□ -0.11
Atxn1P54254 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Atxn1P54254 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.36□□□□□ -0.11
Atxn1P54254 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atxn1P54254 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Atxn1P54254 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Atxn1P54254 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atxn1P54254 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atxn1P54254 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atxn1P54254 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.35□□□□□ -0.11
Atxn1P54254 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atxn1P54254 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atxn1P54254 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atxn1P54254 Gm27892-201ENSMUST00000185017 106 ntBASIC14.35□□□□□ -0.11
Atxn1P54254 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atxn1P54254 Gm45841-201ENSMUST00000207700 164 ntBASIC14.35□□□□□ -0.11
Atxn1P54254 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atxn1P54254 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atxn1P54254 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atxn1P54254 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atxn1P54254 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atxn1P54254 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atxn1P54254 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atxn1P54254 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atxn1P54254 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Atxn1P54254 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atxn1P54254 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Atxn1P54254 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atxn1P54254 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atxn1P54254 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atxn1P54254 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Atxn1P54254 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atxn1P54254 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Atxn1P54254 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atxn1P54254 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.34□□□□□ -0.11
Atxn1P54254 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atxn1P54254 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atxn1P54254 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Atxn1P54254 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.34□□□□□ -0.11
Atxn1P54254 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms