Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Fdft1P53798 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Fdft1P53798 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Fdft1P53798 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Fdft1P53798 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.47□□□□□ -0.09
Fdft1P53798 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Fdft1P53798 Gm9727-201ENSMUST00000161387 555 ntBASIC14.47□□□□□ -0.09
Fdft1P53798 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.47□□□□□ -0.09
Fdft1P53798 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.47□□□□□ -0.09
Fdft1P53798 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.47□□□□□ -0.09
Fdft1P53798 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.47□□□□□ -0.09
Fdft1P53798 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Fdft1P53798 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.47□□□□□ -0.09
Fdft1P53798 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Fdft1P53798 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Fdft1P53798 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fdft1P53798 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fdft1P53798 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.46□□□□□ -0.09
Fdft1P53798 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Fdft1P53798 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Fdft1P53798 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Fdft1P53798 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.46□□□□□ -0.09
Fdft1P53798 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Fdft1P53798 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Fdft1P53798 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fdft1P53798 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Fdft1P53798 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Fdft1P53798 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fdft1P53798 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fdft1P53798 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Fdft1P53798 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Fdft1P53798 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fdft1P53798 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Fdft1P53798 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Fdft1P53798 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Fdft1P53798 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Fdft1P53798 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Fdft1P53798 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Fdft1P53798 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Fdft1P53798 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Fdft1P53798 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.45□□□□□ -0.1
Fdft1P53798 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Fdft1P53798 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Fdft1P53798 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Fdft1P53798 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.45□□□□□ -0.1
Fdft1P53798 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.45□□□□□ -0.1
Fdft1P53798 Gm12260-201ENSMUST00000122447 411 ntBASIC14.45□□□□□ -0.1
Fdft1P53798 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.45□□□□□ -0.1
Fdft1P53798 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Fdft1P53798 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Fdft1P53798 Gm27301-201ENSMUST00000184012 127 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms