Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.72□□□□□ -0.05
Sox1P53783 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox1P53783 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.72□□□□□ -0.05
Sox1P53783 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox1P53783 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox1P53783 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox1P53783 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox1P53783 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox1P53783 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox1P53783 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox1P53783 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox1P53783 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox1P53783 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.72□□□□□ -0.05
Sox1P53783 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sox1P53783 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sox1P53783 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sox1P53783 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox1P53783 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox1P53783 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.71□□□□□ -0.05
Sox1P53783 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox1P53783 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox1P53783 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox1P53783 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.71□□□□□ -0.05
Sox1P53783 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.71□□□□□ -0.05
Sox1P53783 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.71□□□□□ -0.05
Sox1P53783 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.71□□□□□ -0.05
Sox1P53783 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.71□□□□□ -0.05
Sox1P53783 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.71□□□□□ -0.05
Sox1P53783 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.71□□□□□ -0.05
Sox1P53783 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.71□□□□□ -0.05
Sox1P53783 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.71□□□□□ -0.05
Sox1P53783 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.71□□□□□ -0.05
Sox1P53783 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox1P53783 Gm5363-201ENSMUST00000211927 938 ntBASIC14.71□□□□□ -0.05
Sox1P53783 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Sox1P53783 Gm29787-201ENSMUST00000222129 849 ntBASIC14.71□□□□□ -0.05
Sox1P53783 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox1P53783 Gm5161-201ENSMUST00000075243 853 ntBASIC14.71□□□□□ -0.05
Sox1P53783 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox1P53783 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox1P53783 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox1P53783 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Sox1P53783 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox1P53783 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox1P53783 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.71□□□□□ -0.06
Sox1P53783 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Sox1P53783 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sox1P53783 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sox1P53783 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Sox1P53783 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sox1P53783 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox1P53783 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox1P53783 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Sox1P53783 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox1P53783 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Sox1P53783 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox1P53783 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Sox1P53783 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox1P53783 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.7□□□□□ -0.06
Sox1P53783 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.7□□□□□ -0.06
Sox1P53783 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.7□□□□□ -0.06
Sox1P53783 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.7□□□□□ -0.06
Sox1P53783 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.7□□□□□ -0.06
Sox1P53783 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Sox1P53783 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox1P53783 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.7□□□□□ -0.06
Sox1P53783 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox1P53783 BC001981-202ENSMUST00000191393 1545 ntBASIC14.7□□□□□ -0.06
Sox1P53783 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox1P53783 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox1P53783 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox1P53783 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox1P53783 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.7□□□□□ -0.06
Sox1P53783 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.7□□□□□ -0.06
Sox1P53783 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox1P53783 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.7□□□□□ -0.06
Sox1P53783 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.7□□□□□ -0.06
Sox1P53783 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox1P53783 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox1P53783 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox1P53783 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox1P53783 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.69□□□□□ -0.06
Sox1P53783 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
Sox1P53783 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox1P53783 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox1P53783 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.69□□□□□ -0.06
Sox1P53783 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sox1P53783 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Sox1P53783 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.69□□□□□ -0.06
Sox1P53783 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox1P53783 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox1P53783 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.69□□□□□ -0.06
Sox1P53783 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.69□□□□□ -0.06
Sox1P53783 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox1P53783 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Sox1P53783 Mir7032-201ENSMUST00000185154 79 ntBASIC14.69□□□□□ -0.06
Sox1P53783 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.69□□□□□ -0.06
Sox1P53783 Gm45865-201ENSMUST00000211815 945 ntBASIC14.69□□□□□ -0.06
Sox1P53783 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.69□□□□□ -0.06
Sox1P53783 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms