Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.37■□□□□ 0.69
HTTP42858 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HTTP42858 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.37■□□□□ 0.69
HTTP42858 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HTTP42858 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HTTP42858 STK19B-204ENST00000512515 211 ntBASIC19.37■□□□□ 0.69
HTTP42858 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HTTP42858 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HTTP42858 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HTTP42858 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.37■□□□□ 0.69
HTTP42858 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
HTTP42858 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
HTTP42858 MIR658-201ENST00000385210 100 ntBASIC19.36■□□□□ 0.69
HTTP42858 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HTTP42858 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.36■□□□□ 0.69
HTTP42858 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HTTP42858 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HTTP42858 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.36■□□□□ 0.69
HTTP42858 AC093677.2-201ENST00000600169 1863 ntBASIC19.36■□□□□ 0.69
HTTP42858 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
HTTP42858 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HTTP42858 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.36■□□□□ 0.69
HTTP42858 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.36■□□□□ 0.69
HTTP42858 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HTTP42858 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.36■□□□□ 0.69
HTTP42858 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HTTP42858 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HTTP42858 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.36■□□□□ 0.69
HTTP42858 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
HTTP42858 AC135776.1-201ENST00000319817 2481 ntBASIC19.36■□□□□ 0.69
HTTP42858 AL135999.2-201ENST00000622438 1686 ntBASIC19.36■□□□□ 0.69
HTTP42858 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.36■□□□□ 0.69
HTTP42858 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.36■□□□□ 0.69
HTTP42858 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HTTP42858 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HTTP42858 AC004790.1-201ENST00000612686 536 ntBASIC19.36■□□□□ 0.69
HTTP42858 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HTTP42858 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HTTP42858 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HTTP42858 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.35■□□□□ 0.69
HTTP42858 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HTTP42858 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.35■□□□□ 0.69
HTTP42858 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HTTP42858 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HTTP42858 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.35■□□□□ 0.69
HTTP42858 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HTTP42858 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HTTP42858 HCG4-201ENST00000418983 998 ntBASIC19.35■□□□□ 0.69
HTTP42858 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
HTTP42858 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
HTTP42858 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HTTP42858 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HTTP42858 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.35■□□□□ 0.69
HTTP42858 ALG1L8P-201ENST00000533887 760 ntBASIC19.35■□□□□ 0.69
HTTP42858 API5-211ENST00000534695 560 ntTSL 5 BASIC19.35■□□□□ 0.69
HTTP42858 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HTTP42858 AC004233.3-201ENST00000607794 1269 ntBASIC19.35■□□□□ 0.69
HTTP42858 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
HTTP42858 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HTTP42858 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.35■□□□□ 0.69
HTTP42858 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.35■□□□□ 0.69
HTTP42858 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.35■□□□□ 0.69
HTTP42858 AC140912.1-201ENST00000577171 1054 ntBASIC19.35■□□□□ 0.69
HTTP42858 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.35■□□□□ 0.69
HTTP42858 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.35■□□□□ 0.69
HTTP42858 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.35■□□□□ 0.69
HTTP42858 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HTTP42858 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.35■□□□□ 0.69
HTTP42858 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.35■□□□□ 0.69
HTTP42858 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTTP42858 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTTP42858 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.34■□□□□ 0.69
HTTP42858 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HTTP42858 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HTTP42858 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTTP42858 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HTTP42858 KRT17P8-201ENST00000540749 863 ntBASIC19.34■□□□□ 0.69
HTTP42858 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.34■□□□□ 0.69
HTTP42858 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.34■□□□□ 0.69
HTTP42858 AL645728.2-201ENST00000641974 660 ntBASIC19.34■□□□□ 0.69
HTTP42858 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HTTP42858 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTTP42858 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTTP42858 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.34■□□□□ 0.69
HTTP42858 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.34■□□□□ 0.69
HTTP42858 AC109635.5-201ENST00000533593 962 ntBASIC19.34■□□□□ 0.69
HTTP42858 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HTTP42858 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.34■□□□□ 0.69
HTTP42858 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTTP42858 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HTTP42858 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HTTP42858 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HTTP42858 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HTTP42858 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
HTTP42858 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HTTP42858 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
HTTP42858 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.33■□□□□ 0.69
HTTP42858 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
HTTP42858 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.33■□□□□ 0.69
HTTP42858 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms