Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.72□□□□□ -0.37
Upk2P38575 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Upk2P38575 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk2P38575 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk2P38575 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk2P38575 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk2P38575 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.71□□□□□ -0.37
Upk2P38575 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk2P38575 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Upk2P38575 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk2P38575 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk2P38575 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk2P38575 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk2P38575 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Upk2P38575 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk2P38575 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk2P38575 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.71□□□□□ -0.37
Upk2P38575 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk2P38575 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.71□□□□□ -0.37
Upk2P38575 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Upk2P38575 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.71□□□□□ -0.37
Upk2P38575 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk2P38575 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Upk2P38575 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Upk2P38575 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
Upk2P38575 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Upk2P38575 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.71□□□□□ -0.38
Upk2P38575 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upk2P38575 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upk2P38575 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upk2P38575 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.71□□□□□ -0.38
Upk2P38575 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upk2P38575 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Upk2P38575 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Upk2P38575 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Upk2P38575 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.7□□□□□ -0.38
Upk2P38575 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.7□□□□□ -0.38
Upk2P38575 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.7□□□□□ -0.38
Upk2P38575 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.7□□□□□ -0.38
Upk2P38575 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.7□□□□□ -0.38
Upk2P38575 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Gm10275-202ENSMUST00000168697 495 ntBASIC12.7□□□□□ -0.38
Upk2P38575 Gm43514-201ENSMUST00000198852 424 ntBASIC12.7□□□□□ -0.38
Upk2P38575 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.7□□□□□ -0.38
Upk2P38575 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.7□□□□□ -0.38
Upk2P38575 Gm18057-201ENSMUST00000208220 503 ntBASIC12.7□□□□□ -0.38
Upk2P38575 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.7□□□□□ -0.38
Upk2P38575 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.7□□□□□ -0.38
Upk2P38575 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Upk2P38575 Gm10275-201ENSMUST00000092620 635 ntBASIC12.7□□□□□ -0.38
Upk2P38575 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Upk2P38575 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk2P38575 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
Upk2P38575 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Upk2P38575 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Upk2P38575 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.69□□□□□ -0.38
Upk2P38575 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.69□□□□□ -0.38
Upk2P38575 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.69□□□□□ -0.38
Upk2P38575 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Upk2P38575 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk2P38575 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Upk2P38575 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms