Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Thbs1P35441 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thbs1P35441 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Thbs1P35441 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thbs1P35441 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Thbs1P35441 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thbs1P35441 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thbs1P35441 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Thbs1P35441 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thbs1P35441 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thbs1P35441 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thbs1P35441 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thbs1P35441 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.4□□□□□ -0.26
Thbs1P35441 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thbs1P35441 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Thbs1P35441 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thbs1P35441 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Thbs1P35441 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thbs1P35441 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.4□□□□□ -0.26
Thbs1P35441 Gm15427-201ENSMUST00000117288 531 ntBASIC13.4□□□□□ -0.26
Thbs1P35441 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.4□□□□□ -0.26
Thbs1P35441 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.4□□□□□ -0.26
Thbs1P35441 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.4□□□□□ -0.26
Thbs1P35441 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Thbs1P35441 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thbs1P35441 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Thbs1P35441 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Thbs1P35441 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thbs1P35441 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thbs1P35441 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Thbs1P35441 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thbs1P35441 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Thbs1P35441 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Thbs1P35441 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Thbs1P35441 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.39□□□□□ -0.27
Thbs1P35441 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.39□□□□□ -0.27
Thbs1P35441 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.39□□□□□ -0.27
Thbs1P35441 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.39□□□□□ -0.27
Thbs1P35441 Gm25911-201ENSMUST00000157621 56 ntBASIC13.39□□□□□ -0.27
Thbs1P35441 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Thbs1P35441 Gm44492-201ENSMUST00000197012 141 ntBASIC13.39□□□□□ -0.27
Thbs1P35441 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.39□□□□□ -0.27
Thbs1P35441 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Thbs1P35441 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Thbs1P35441 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Thbs1P35441 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Thbs1P35441 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.39□□□□□ -0.27
Thbs1P35441 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.39□□□□□ -0.27
Thbs1P35441 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.39□□□□□ -0.27
Thbs1P35441 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Thbs1P35441 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Thbs1P35441 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Thbs1P35441 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Thbs1P35441 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Thbs1P35441 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Thbs1P35441 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Thbs1P35441 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Thbs1P35441 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.38□□□□□ -0.27
Thbs1P35441 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.38□□□□□ -0.27
Thbs1P35441 Gm15483-201ENSMUST00000120338 456 ntBASIC13.38□□□□□ -0.27
Thbs1P35441 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thbs1P35441 Gm24513-201ENSMUST00000174964 138 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms