Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmga1P17095 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmga1P17095 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmga1P17095 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmga1P17095 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmga1P17095 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hmga1P17095 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Hmga1P17095 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmga1P17095 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Hmga1P17095 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmga1P17095 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmga1P17095 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmga1P17095 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmga1P17095 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Hmga1P17095 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Hmga1P17095 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmga1P17095 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Hmga1P17095 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmga1P17095 Gm12859-201ENSMUST00000117834 427 ntBASIC14.74□□□□□ -0.05
Hmga1P17095 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.74□□□□□ -0.05
Hmga1P17095 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.74□□□□□ -0.05
Hmga1P17095 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmga1P17095 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.74□□□□□ -0.05
Hmga1P17095 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.74□□□□□ -0.05
Hmga1P17095 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.74□□□□□ -0.05
Hmga1P17095 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.74□□□□□ -0.05
Hmga1P17095 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hmga1P17095 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.74□□□□□ -0.05
Hmga1P17095 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmga1P17095 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmga1P17095 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.74□□□□□ -0.05
Hmga1P17095 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hmga1P17095 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmga1P17095 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmga1P17095 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmga1P17095 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmga1P17095 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Hmga1P17095 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmga1P17095 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.74□□□□□ -0.05
Hmga1P17095 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmga1P17095 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Hmga1P17095 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmga1P17095 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmga1P17095 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.73□□□□□ -0.05
Hmga1P17095 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.73□□□□□ -0.05
Hmga1P17095 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmga1P17095 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmga1P17095 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.73□□□□□ -0.05
Hmga1P17095 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmga1P17095 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.73□□□□□ -0.05
Hmga1P17095 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.73□□□□□ -0.05
Hmga1P17095 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.73□□□□□ -0.05
Hmga1P17095 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmga1P17095 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Hmga1P17095 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmga1P17095 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmga1P17095 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmga1P17095 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Hmga1P17095 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hmga1P17095 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.73□□□□□ -0.05
Hmga1P17095 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hmga1P17095 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmga1P17095 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.72□□□□□ -0.05
Hmga1P17095 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Hmga1P17095 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Hmga1P17095 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Gm15393-201ENSMUST00000120499 219 ntBASIC14.72□□□□□ -0.05
Hmga1P17095 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Hmga1P17095 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.72□□□□□ -0.05
Hmga1P17095 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Hmga1P17095 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Hmga1P17095 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Hmga1P17095 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.72□□□□□ -0.05
Hmga1P17095 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Hmga1P17095 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmga1P17095 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmga1P17095 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmga1P17095 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Hmga1P17095 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms