Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cntn1P12960 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.89□□□□□ -0.19
Cntn1P12960 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cntn1P12960 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cntn1P12960 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cntn1P12960 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cntn1P12960 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cntn1P12960 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cntn1P12960 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cntn1P12960 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Cntn1P12960 Gm14057-201ENSMUST00000120631 482 ntBASIC13.89□□□□□ -0.19
Cntn1P12960 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.89□□□□□ -0.19
Cntn1P12960 Gm37230-201ENSMUST00000194491 818 ntBASIC13.89□□□□□ -0.19
Cntn1P12960 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cntn1P12960 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cntn1P12960 Gm9182-201ENSMUST00000217829 639 ntBASIC13.89□□□□□ -0.19
Cntn1P12960 Gm6888-201ENSMUST00000221983 706 ntBASIC13.89□□□□□ -0.19
Cntn1P12960 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cntn1P12960 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cntn1P12960 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Cntn1P12960 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.89□□□□□ -0.19
Cntn1P12960 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.89□□□□□ -0.19
Cntn1P12960 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cntn1P12960 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cntn1P12960 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.89□□□□□ -0.19
Cntn1P12960 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cntn1P12960 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cntn1P12960 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.89□□□□□ -0.19
Cntn1P12960 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cntn1P12960 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cntn1P12960 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cntn1P12960 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.88□□□□□ -0.19
Cntn1P12960 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cntn1P12960 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.88□□□□□ -0.19
Cntn1P12960 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.88□□□□□ -0.19
Cntn1P12960 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Cntn1P12960 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.88□□□□□ -0.19
Cntn1P12960 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cntn1P12960 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cntn1P12960 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cntn1P12960 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Cntn1P12960 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cntn1P12960 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.87□□□□□ -0.19
Cntn1P12960 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.87□□□□□ -0.19
Cntn1P12960 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Cntn1P12960 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cntn1P12960 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cntn1P12960 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cntn1P12960 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Cntn1P12960 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cntn1P12960 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.87□□□□□ -0.19
Cntn1P12960 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cntn1P12960 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms