Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cxcl1P12850 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.01□□□□□ -0.49
Cxcl1P12850 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cxcl1P12850 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Cxcl1P12850 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cxcl1P12850 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cxcl1P12850 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.01□□□□□ -0.49
Cxcl1P12850 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl1P12850 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cxcl1P12850 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl1P12850 Tcf21-202ENSMUST00000218002 1788 ntBASIC12□□□□□ -0.49
Cxcl1P12850 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl1P12850 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl1P12850 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12□□□□□ -0.49
Cxcl1P12850 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cxcl1P12850 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl1P12850 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Cxcl1P12850 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl1P12850 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cxcl1P12850 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12□□□□□ -0.49
Cxcl1P12850 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cxcl1P12850 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cxcl1P12850 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12□□□□□ -0.49
Cxcl1P12850 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12□□□□□ -0.49
Cxcl1P12850 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl1P12850 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl1P12850 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl1P12850 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl1P12850 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl1P12850 Gm18856-201ENSMUST00000178096 1374 ntBASIC12□□□□□ -0.49
Cxcl1P12850 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl1P12850 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Cxcl1P12850 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl1P12850 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl1P12850 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cxcl1P12850 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12□□□□□ -0.49
Cxcl1P12850 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl1P12850 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl1P12850 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl1P12850 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cxcl1P12850 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cxcl1P12850 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.99□□□□□ -0.49
Cxcl1P12850 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.99□□□□□ -0.49
Cxcl1P12850 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.99□□□□□ -0.49
Cxcl1P12850 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.99□□□□□ -0.49
Cxcl1P12850 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cxcl1P12850 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Cxcl1P12850 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.99□□□□□ -0.49
Cxcl1P12850 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cxcl1P12850 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cxcl1P12850 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl1P12850 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl1P12850 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl1P12850 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl1P12850 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cxcl1P12850 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms