Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa4P06798 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hoxa4P06798 Gm13453-201ENSMUST00000118708 357 ntBASIC14.23□□□□□ -0.13
Hoxa4P06798 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa4P06798 AA543401-201ENSMUST00000164248 1269 ntBASIC14.23□□□□□ -0.13
Hoxa4P06798 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa4P06798 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hoxa4P06798 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hoxa4P06798 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa4P06798 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.23□□□□□ -0.13
Hoxa4P06798 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa4P06798 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa4P06798 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa4P06798 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa4P06798 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa4P06798 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa4P06798 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.23□□□□□ -0.13
Hoxa4P06798 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxa4P06798 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.22□□□□□ -0.13
Hoxa4P06798 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.22□□□□□ -0.13
Hoxa4P06798 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.22□□□□□ -0.13
Hoxa4P06798 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.22□□□□□ -0.13
Hoxa4P06798 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hoxa4P06798 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.22□□□□□ -0.13
Hoxa4P06798 Shd-206ENSMUST00000225145 998 ntBASIC14.22□□□□□ -0.13
Hoxa4P06798 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.22□□□□□ -0.13
Hoxa4P06798 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.22□□□□□ -0.13
Hoxa4P06798 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.22□□□□□ -0.13
Hoxa4P06798 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Hoxa4P06798 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Hoxa4P06798 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hoxa4P06798 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hoxa4P06798 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa4P06798 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
Hoxa4P06798 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.21□□□□□ -0.13
Hoxa4P06798 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Hoxa4P06798 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Gm14767-201ENSMUST00000121559 586 ntBASIC14.21□□□□□ -0.13
Hoxa4P06798 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.21□□□□□ -0.13
Hoxa4P06798 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Hoxa4P06798 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Mir125a-201ENSMUST00000083545 68 ntBASIC14.21□□□□□ -0.13
Hoxa4P06798 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.21□□□□□ -0.13
Hoxa4P06798 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Hoxa4P06798 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Hoxa4P06798 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa4P06798 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxa4P06798 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Hoxa4P06798 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxa4P06798 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxa4P06798 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxa4P06798 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Hoxa4P06798 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa4P06798 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa4P06798 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Hoxa4P06798 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.2□□□□□ -0.14
Hoxa4P06798 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa4P06798 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms