Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.95□□□□□ -0.02
PrnpP04925 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
PrnpP04925 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PrnpP04925 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PrnpP04925 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PrnpP04925 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
PrnpP04925 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
PrnpP04925 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PrnpP04925 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PrnpP04925 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PrnpP04925 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PrnpP04925 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PrnpP04925 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PrnpP04925 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PrnpP04925 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PrnpP04925 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PrnpP04925 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PrnpP04925 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.94□□□□□ -0.02
PrnpP04925 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PrnpP04925 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PrnpP04925 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PrnpP04925 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PrnpP04925 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PrnpP04925 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PrnpP04925 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PrnpP04925 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.94□□□□□ -0.02
PrnpP04925 Gm12341-201ENSMUST00000119724 503 ntBASIC14.94□□□□□ -0.02
PrnpP04925 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.94□□□□□ -0.02
PrnpP04925 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.94□□□□□ -0.02
PrnpP04925 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.94□□□□□ -0.02
PrnpP04925 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PrnpP04925 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PrnpP04925 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.94□□□□□ -0.02
PrnpP04925 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PrnpP04925 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.94□□□□□ -0.02
PrnpP04925 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.94□□□□□ -0.02
PrnpP04925 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.94□□□□□ -0.02
PrnpP04925 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.94□□□□□ -0.02
PrnpP04925 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.94□□□□□ -0.02
PrnpP04925 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PrnpP04925 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PrnpP04925 BC037039-201ENSMUST00000192003 2205 ntBASIC14.94□□□□□ -0.02
PrnpP04925 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PrnpP04925 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PrnpP04925 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PrnpP04925 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PrnpP04925 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
PrnpP04925 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Sybu-209ENSMUST00000228639 4113 ntBASIC14.93□□□□□ -0.02
PrnpP04925 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.93□□□□□ -0.02
PrnpP04925 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.93□□□□□ -0.02
PrnpP04925 Gm44719-201ENSMUST00000206404 149 ntBASIC14.93□□□□□ -0.02
PrnpP04925 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.93□□□□□ -0.02
PrnpP04925 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PrnpP04925 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PrnpP04925 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PrnpP04925 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PrnpP04925 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PrnpP04925 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PrnpP04925 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PrnpP04925 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PrnpP04925 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PrnpP04925 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
PrnpP04925 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PrnpP04925 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PrnpP04925 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PrnpP04925 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PrnpP04925 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PrnpP04925 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PrnpP04925 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PrnpP04925 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.92□□□□□ -0.02
PrnpP04925 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.92□□□□□ -0.02
PrnpP04925 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PrnpP04925 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PrnpP04925 Gm17150-201ENSMUST00000165577 381 ntBASIC14.92□□□□□ -0.02
PrnpP04925 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PrnpP04925 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PrnpP04925 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms