Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ubr1O70481 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ubr1O70481 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Ubr1O70481 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr1O70481 Gm12928-201ENSMUST00000117115 573 ntBASIC18.47■□□□□ 0.55
Ubr1O70481 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr1O70481 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC18.47■□□□□ 0.55
Ubr1O70481 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC18.47■□□□□ 0.55
Ubr1O70481 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC18.47■□□□□ 0.55
Ubr1O70481 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC18.47■□□□□ 0.55
Ubr1O70481 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC18.47■□□□□ 0.55
Ubr1O70481 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr1O70481 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC18.47■□□□□ 0.55
Ubr1O70481 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr1O70481 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr1O70481 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr1O70481 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr1O70481 AC126549.2-201ENSMUST00000223997 1976 ntBASIC18.47■□□□□ 0.55
Ubr1O70481 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr1O70481 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr1O70481 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr1O70481 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr1O70481 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC18.47■□□□□ 0.55
Ubr1O70481 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr1O70481 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC18.47■□□□□ 0.55
Ubr1O70481 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC18.47■□□□□ 0.55
Ubr1O70481 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr1O70481 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr1O70481 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ubr1O70481 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr1O70481 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr1O70481 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr1O70481 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ubr1O70481 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ubr1O70481 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ubr1O70481 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubr1O70481 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubr1O70481 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ubr1O70481 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Ubr1O70481 Gm24644-201ENSMUST00000157114 139 ntBASIC18.46■□□□□ 0.55
Ubr1O70481 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubr1O70481 Gm24420-201ENSMUST00000176676 59 ntBASIC18.46■□□□□ 0.55
Ubr1O70481 Gm29608-201ENSMUST00000190444 463 ntBASIC18.46■□□□□ 0.55
Ubr1O70481 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubr1O70481 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubr1O70481 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubr1O70481 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubr1O70481 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubr1O70481 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubr1O70481 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ubr1O70481 Gm9200-201ENSMUST00000118513 1354 ntBASIC18.46■□□□□ 0.55
Ubr1O70481 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ubr1O70481 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ubr1O70481 Gm6159-201ENSMUST00000191249 1724 ntBASIC18.45■□□□□ 0.54
Ubr1O70481 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr1O70481 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr1O70481 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr1O70481 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr1O70481 Gm44645-201ENSMUST00000205492 1653 ntBASIC18.45■□□□□ 0.54
Ubr1O70481 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr1O70481 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Ubr1O70481 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC18.45■□□□□ 0.54
Ubr1O70481 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC18.45■□□□□ 0.54
Ubr1O70481 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC18.45■□□□□ 0.54
Ubr1O70481 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr1O70481 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr1O70481 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr1O70481 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr1O70481 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ubr1O70481 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ubr1O70481 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr1O70481 Gm13050-201ENSMUST00000122149 1345 ntBASIC18.45■□□□□ 0.54
Ubr1O70481 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr1O70481 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr1O70481 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
Ubr1O70481 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr1O70481 Gm6152-201ENSMUST00000151704 340 ntBASIC18.45■□□□□ 0.54
Ubr1O70481 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr1O70481 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr1O70481 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ubr1O70481 Gm42442-201ENSMUST00000197951 1133 ntBASIC18.45■□□□□ 0.54
Ubr1O70481 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC18.45■□□□□ 0.54
Ubr1O70481 Gm17794-201ENSMUST00000220252 955 ntBASIC18.45■□□□□ 0.54
Ubr1O70481 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr1O70481 Gm10012-201ENSMUST00000078252 192 ntBASIC18.45■□□□□ 0.54
Ubr1O70481 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr1O70481 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ubr1O70481 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Ubr1O70481 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr1O70481 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr1O70481 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ubr1O70481 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ubr1O70481 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubr1O70481 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubr1O70481 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Ubr1O70481 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubr1O70481 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ubr1O70481 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC18.44■□□□□ 0.54
Ubr1O70481 AC166997.1-201ENSMUST00000225122 572 ntBASIC18.44■□□□□ 0.54
Ubr1O70481 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms