Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf2O35218 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf2O35218 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 Gm13597-201ENSMUST00000121239 375 ntBASIC15.51■□□□□ 0.07
Cpsf2O35218 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.51■□□□□ 0.07
Cpsf2O35218 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 Gm9726-201ENSMUST00000180321 678 ntBASIC15.51■□□□□ 0.07
Cpsf2O35218 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.51■□□□□ 0.07
Cpsf2O35218 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.51■□□□□ 0.07
Cpsf2O35218 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf2O35218 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.51■□□□□ 0.07
Cpsf2O35218 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.5■□□□□ 0.07
Cpsf2O35218 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Cpsf2O35218 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Cpsf2O35218 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.5■□□□□ 0.07
Cpsf2O35218 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Cpsf2O35218 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Cpsf2O35218 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.5■□□□□ 0.07
Cpsf2O35218 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Cpsf2O35218 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Cpsf2O35218 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf2O35218 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf2O35218 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf2O35218 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf2O35218 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf2O35218 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf2O35218 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf2O35218 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf2O35218 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf2O35218 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf2O35218 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Cpsf2O35218 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.49■□□□□ 0.07
Cpsf2O35218 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf2O35218 Mir5126-201ENSMUST00000175513 77 ntBASIC15.49■□□□□ 0.07
Cpsf2O35218 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Cpsf2O35218 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.49■□□□□ 0.07
Cpsf2O35218 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.49■□□□□ 0.07
Cpsf2O35218 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.49■□□□□ 0.07
Cpsf2O35218 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf2O35218 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Cpsf2O35218 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf2O35218 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Cpsf2O35218 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf2O35218 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf2O35218 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf2O35218 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Cpsf2O35218 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.49■□□□□ 0.07
Cpsf2O35218 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cpsf2O35218 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf2O35218 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf2O35218 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf2O35218 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf2O35218 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.48■□□□□ 0.07
Cpsf2O35218 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf2O35218 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cpsf2O35218 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.48■□□□□ 0.07
Cpsf2O35218 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.48■□□□□ 0.07
Cpsf2O35218 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms