Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.93□□□□□ -0.34
Alx4O35137 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Alx4O35137 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.93□□□□□ -0.34
Alx4O35137 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.93□□□□□ -0.34
Alx4O35137 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Alx4O35137 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Alx4O35137 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Alx4O35137 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Alx4O35137 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Alx4O35137 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Alx4O35137 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.92□□□□□ -0.34
Alx4O35137 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.92□□□□□ -0.34
Alx4O35137 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.92□□□□□ -0.34
Alx4O35137 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.92□□□□□ -0.34
Alx4O35137 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Alx4O35137 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Alx4O35137 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Alx4O35137 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.92□□□□□ -0.34
Alx4O35137 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.91□□□□□ -0.34
Alx4O35137 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Alx4O35137 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Alx4O35137 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.91□□□□□ -0.34
Alx4O35137 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Alx4O35137 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Alx4O35137 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.91□□□□□ -0.34
Alx4O35137 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.91□□□□□ -0.34
Alx4O35137 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.91□□□□□ -0.34
Alx4O35137 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.91□□□□□ -0.34
Alx4O35137 Gm6550-201ENSMUST00000187574 993 ntBASIC12.91□□□□□ -0.34
Alx4O35137 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.91□□□□□ -0.34
Alx4O35137 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.91□□□□□ -0.34
Alx4O35137 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Birc2-201ENSMUST00000054878 378 ntBASIC12.91□□□□□ -0.34
Alx4O35137 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Gm10819-201ENSMUST00000099988 561 ntBASIC12.91□□□□□ -0.34
Alx4O35137 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Alx4O35137 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.91□□□□□ -0.34
Alx4O35137 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Alx4O35137 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Alx4O35137 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Alx4O35137 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Alx4O35137 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Alx4O35137 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms